RNase III / Rnt1p

KNOWN SUBSTRATES OF Rnt1p :

AGNN tetraloop + part of stem Name Chromosome Strand Localization of the loop + part of stem Distance from cleavage site Distance from mature ARN Sequence Ref
                 

U2

 II C 680645
to
680634 		13-14 +34
 SGD Link

U4

 V C 167280
to
167269 		14-15 +146
 SGD Link

U5

 VII C 939425
to
939414 		13-14 +37
 SGD Link

snR47

 IV C 541757
to
541746 		18-16 -54
 SGD Link

snR76

 XIII W 297665
to
297676 		17 -54 SGD Link

U1

 XIV C 230010
to
229999 		15-18 +94 SGD Link

snR36

 XV C 680964
to
680953 		17-16 -91 SGD Link

snR78

 XIII W 297411
to
297422 		LR-16 +59 SGD Link

snR75

 XIII W 298068
to
298079 		21 +73 SGD Link

snR73

 XIII W 298495
to
298506 		16 +93 SGD Link

snR43

 III C 107777
to
107766 		14-16 -59 SGD Link

snR40

 XIV W 89115
to
89126 		LR-16 -86 SGD Link

snR51

 XVI C 718848
to
718837 		19-17 -36 SGD Link

25S

 XII C 460898
to
460887 		15 +26 SGD Link

25S

 XII C 451761
to
451750 		15 +26 SGD Link

snR190

 X C 139934
to
139923 		LRI -59 SGD Link

snR63

 IV C 323557
to
323546 		17 -79 SGD Link

snR60

 X C 349244
to
349233 		25-17 -89 SGD Link

snR39

 VII C 365372
to
365361 		14-15 -111 SGD Link

snR67

 V W 61157
to
61168 		LR-16 -188 SGD Link

snR39B

 VII C 366557
to
366546 		  -79 SGD Link

snR55

 XII C 794842
to
794831 		LR-12 -41 SGD Link

snR68

 IX W 96992
to
97003 		16-14 -112 SGD Link

snR58

 XV C 136246
to
136235 		17 -57 SGD Link

snR65

 III W 177099
to
177110 		16 -72 SGD Link

snR62

 XV C 409910
to
409899 		13-15 -40 SGD Link

snR66

 XIV W 586028
to
586039 		13-19 -55 SGD Link

snR50

 XV W 259389
to
259400 		LR(47) -94 SGD Link

snR69

 XI W 364299
to
364310 		LR(51)-14 -113 SGD Link

snR64

 XI W 38724
to
38735 		15 -81 SGD Link

snR52

 V C 431305
to
431294 		14 -82 SGD Link

snR57

 XII C 795128
to
795117 		20-17 -97 SGD Link

snR56

 II W 88090
to
88101 		13-15 -90 SGD Link

snR71

 VIII W 411151
to
411162 		16 -71 SGD Link

rpl18a

 XV C 94146
to
94135 		15   SGD Link

rps22b

 XII W 856108
to
856119 		15-17   SGD Link

snR59

 XVI W 173712
to
173723 		22-15 -107 SGD Link

snR17a

 XV W 780631
to
780642 		17-16 +41 SGD Link

MIG2

 VII W 96111
to
96122 		15-16   SGD Link

snR48

 VII W 609486
to
609497 		16-16 -95 SGD Link

snR46

 VII W 545255
to
545266 		14-17 -114 SGD Link

snR17b

 XVI C 281017
to
281006 		  +44 SGD  

snR79

 XII C 348591
to
348580 		15 -72 SGD Link

 
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